Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.18□□□□□ -0.46
Raet1aO08602 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.18□□□□□ -0.46
Raet1aO08602 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.18□□□□□ -0.46
Raet1aO08602 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.18□□□□□ -0.46
Raet1aO08602 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Raet1aO08602 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1aO08602 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Raet1aO08602 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Gm44872-201ENSMUST00000207864 420 ntBASIC12.17□□□□□ -0.46
Raet1aO08602 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.17□□□□□ -0.46
Raet1aO08602 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.17□□□□□ -0.46
Raet1aO08602 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.17□□□□□ -0.46
Raet1aO08602 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Raet1aO08602 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Raet1aO08602 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
Raet1aO08602 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Raet1aO08602 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms