Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm15371-201ENSMUST00000117057 784 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm12928-201ENSMUST00000117115 573 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm29608-201ENSMUST00000190444 463 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm38144-201ENSMUST00000192790 465 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm44397-201ENSMUST00000195950 113 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.08■□□□□ 0.17
Pcdhb9E9Q5G2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Gm11478-201ENSMUST00000117851 599 ntBASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Gm9002-201ENSMUST00000178437 499 ntBASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb9E9Q5G2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb9E9Q5G2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms