Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm13829-201ENSMUST00000119600 138 ntBASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gm8927-201ENSMUST00000181978 981 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gm3222-201ENSMUST00000071282 990 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Matn2-206ENSMUST00000228570 2798 ntBASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh17E9PXF0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh17E9PXF0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm43094-201ENSMUST00000196549 921 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm6266-201ENSMUST00000203844 806 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm19078-201ENSMUST00000206311 727 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm44719-201ENSMUST00000206404 149 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh17E9PXF0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdh17E9PXF0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms