Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm22877-201ENSMUST00000175451 105 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm3619-201ENSMUST00000219947 775 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a3E9PWQ3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm13286-201ENSMUST00000117750 537 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm11451-201ENSMUST00000118946 630 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm13022-201ENSMUST00000121181 285 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm15881-201ENSMUST00000148792 942 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a3E9PWQ3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Mir497b-201ENSMUST00000093601 125 ntBASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a3E9PWQ3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Gm42518-201ENSMUST00000196277 938 ntBASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a3E9PWQ3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms