Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.79□□□□□ -0.2
Gm28043E0CXC2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm28043E0CXC2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm24158-201ENSMUST00000175263 71 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm29310-201ENSMUST00000185468 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21825-201ENSMUST00000185728 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm29109-201ENSMUST00000185895 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21896-201ENSMUST00000186520 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21873-201ENSMUST00000186728 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21794-201ENSMUST00000187056 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21880-201ENSMUST00000187275 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21826-201ENSMUST00000187451 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21198-201ENSMUST00000188393 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21749-201ENSMUST00000189343 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21901-201ENSMUST00000189568 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm29424-201ENSMUST00000189716 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm28599-201ENSMUST00000189838 694 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21867-201ENSMUST00000189917 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm29269-201ENSMUST00000190087 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21722-201ENSMUST00000190153 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm28423-201ENSMUST00000190701 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21899-201ENSMUST00000190745 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21910-201ENSMUST00000191163 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21849-201ENSMUST00000191571 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm28678-201ENSMUST00000191593 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm20910-201ENSMUST00000193268 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm21871-201ENSMUST00000194621 696 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm28043E0CXC2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gm28043E0CXC2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Gm28043E0CXC2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Gm28043E0CXC2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.77□□□□□ -0.2
Gm28043E0CXC2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gm28043E0CXC2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gm28043E0CXC2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gm28043E0CXC2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.77□□□□□ -0.21
Gm28043E0CXC2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms