Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.29□□□□□ -0.44
Shank1D3YZU1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.29□□□□□ -0.44
Shank1D3YZU1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm26927-201ENSMUST00000182385 965 ntBASIC12.29□□□□□ -0.44
Shank1D3YZU1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm12241-201ENSMUST00000118330 726 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.28□□□□□ -0.44
Shank1D3YZU1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shank1D3YZU1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shank1D3YZU1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shank1D3YZU1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shank1D3YZU1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.27□□□□□ -0.44
Shank1D3YZU1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shank1D3YZU1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.27□□□□□ -0.45
Shank1D3YZU1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.27□□□□□ -0.45
Shank1D3YZU1 Olfr284-202ENSMUST00000206647 966 ntBASIC12.27□□□□□ -0.45
Shank1D3YZU1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Shank1D3YZU1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Shank1D3YZU1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.27□□□□□ -0.45
Shank1D3YZU1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.27□□□□□ -0.45
Shank1D3YZU1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shank1D3YZU1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms