Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.09□□□□□ -0.63
Gm12887B1AVM1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm13036-201ENSMUST00000117799 748 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm15957-201ENSMUST00000118893 974 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm27301-201ENSMUST00000184012 127 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gm12887B1AVM1 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.08□□□□□ -0.64
Gm12887B1AVM1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms