Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gm8885-201ENSMUST00000189382 598 ntBASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm11531-201ENSMUST00000117614 555 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm7857-201ENSMUST00000117957 358 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm14704-201ENSMUST00000120300 874 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm27341-201ENSMUST00000183570 106 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm6458-201ENSMUST00000211573 635 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm14208-201ENSMUST00000119645 678 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm25043-201ENSMUST00000158604 212 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col4a6B1AVK5 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.81□□□□□ -0.2
Col4a6B1AVK5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.8□□□□□ -0.2
Col4a6B1AVK5 Gm14028-201ENSMUST00000117434 479 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms