Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm38144-201ENSMUST00000192790 465 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm15371-201ENSMUST00000117057 784 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm14127-201ENSMUST00000117906 678 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm22331-201ENSMUST00000158066 136 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Mir7085-201ENSMUST00000184353 66 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.28□□□□□ -0.12
Scn1aA2APX8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn1aA2APX8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.27□□□□□ -0.12
Scn1aA2APX8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.27□□□□□ -0.12
Scn1aA2APX8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn1aA2APX8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Gm13226-201ENSMUST00000117838 404 ntBASIC14.27□□□□□ -0.13
Scn1aA2APX8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.27□□□□□ -0.13
Scn1aA2APX8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Gm17794-201ENSMUST00000220252 955 ntBASIC14.27□□□□□ -0.13
Scn1aA2APX8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn1aA2APX8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms