Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Gm3854A0A1B0GSS6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm3854A0A1B0GSS6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Gm3854A0A1B0GSS6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm3854A0A1B0GSS6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm3854A0A1B0GSS6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm12203-201ENSMUST00000118235 598 ntBASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm12209-201ENSMUST00000120089 596 ntBASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Gm3854A0A1B0GSS6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm6013-201ENSMUST00000212264 699 ntBASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm26315-201ENSMUST00000083890 321 ntBASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3854A0A1B0GSS6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm5687-201ENSMUST00000118252 640 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm1335-201ENSMUST00000121653 386 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Gm17330-201ENSMUST00000221047 165 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3854A0A1B0GSS6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms