Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm4875-201ENSMUST00000118257 786 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm15393-201ENSMUST00000120499 219 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm12151-201ENSMUST00000121374 290 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm3436-201ENSMUST00000179930 840 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.43□□□□□ -0.58
Lnp1A0A1B0GSK3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lnp1A0A1B0GSK3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.41□□□□□ -0.58
Lnp1A0A1B0GSK3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms