Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Gm33320-201ENSMUST00000192232 530 ntBASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm2756-201ENSMUST00000195851 400 ntBASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc194A0A140LIT1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm5779-201ENSMUST00000218467 910 ntBASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc194A0A140LIT1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms