Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.1□□□□□ -0.15
Speer3W4VSP1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.09□□□□□ -0.15
Speer3W4VSP1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Olfr286-202ENSMUST00000205305 969 ntBASIC14.09□□□□□ -0.15
Speer3W4VSP1 Gm45612-201ENSMUST00000211320 160 ntBASIC14.09□□□□□ -0.15
Speer3W4VSP1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.09□□□□□ -0.15
Speer3W4VSP1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Speer3W4VSP1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.08□□□□□ -0.15
Speer3W4VSP1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Speer3W4VSP1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Speer3W4VSP1 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.08□□□□□ -0.15
Speer3W4VSP1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Speer3W4VSP1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Speer3W4VSP1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Gm11745-201ENSMUST00000121669 448 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Gm6736-201ENSMUST00000166583 948 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Gm38225-201ENSMUST00000194001 393 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 AC129323.1-201ENSMUST00000216733 470 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.08□□□□□ -0.16
Speer3W4VSP1 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Speer3W4VSP1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms