Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk1bQ9Z2C6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 AA619741-201ENSMUST00000195095 646 ntBASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.73□□□□□ -0.37
Upk1bQ9Z2C6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gm18737-201ENSMUST00000173594 937 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gm17971-201ENSMUST00000190239 806 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gm18027-201ENSMUST00000218947 619 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Upk1bQ9Z2C6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms