Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lhx9Q9WUH2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Gm5035-201ENSMUST00000215581 927 ntBASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lhx9Q9WUH2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm6266-201ENSMUST00000203844 806 ntBASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lhx9Q9WUH2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms