Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pfdn5Q9WU28 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pfdn5Q9WU28 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Mir7071-201ENSMUST00000184847 69 ntBASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pfdn5Q9WU28 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pfdn5Q9WU28 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms