Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim3Q9R1R2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Mir7684-201ENSMUST00000183858 60 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Mir125a-201ENSMUST00000083545 68 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim3Q9R1R2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim3Q9R1R2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms