Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atp6ap1Q9R1Q9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atp6ap1Q9R1Q9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Atp6ap1Q9R1Q9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm24694-201ENSMUST00000180054 110 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm27663-201ENSMUST00000184839 110 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Atp6ap1Q9R1Q9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms