Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rtp4Q9ER80 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rtp4Q9ER80 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rtp4Q9ER80 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rtp4Q9ER80 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.89□□□□□ -0.35
Rtp4Q9ER80 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm15460-201ENSMUST00000118147 391 ntBASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm28760-201ENSMUST00000185995 736 ntBASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.89□□□□□ -0.35
Rtp4Q9ER80 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm6180-201ENSMUST00000065243 498 ntBASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rtp4Q9ER80 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rtp4Q9ER80 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.88□□□□□ -0.35
Rtp4Q9ER80 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rtp4Q9ER80 Gm15393-201ENSMUST00000120499 219 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms