Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Gm15240-201ENSMUST00000118156 720 ntBASIC14.09□□□□□ -0.15
Vps28Q9D1C8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps28Q9D1C8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Gm5279-201ENSMUST00000199575 745 ntBASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps28Q9D1C8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm24420-201ENSMUST00000176676 59 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm5354-201ENSMUST00000182417 973 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm15823-201ENSMUST00000064305 670 ntBASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms