Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx56Q9D0R4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx56Q9D0R4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ddx56Q9D0R4 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.47□□□□□ -0.09
Ddx56Q9D0R4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx56Q9D0R4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx56Q9D0R4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx56Q9D0R4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx56Q9D0R4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ddx56Q9D0R4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx56Q9D0R4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.43□□□□□ -0.1
Ddx56Q9D0R4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ddx56Q9D0R4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms