Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Gm18195-201ENSMUST00000207604 706 ntBASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chaf1bQ9D0N7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chaf1bQ9D0N7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Gm18041-201ENSMUST00000218210 618 ntBASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chaf1bQ9D0N7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.88□□□□□ -0.35
Chaf1bQ9D0N7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms