Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snf8Q9CZ28 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Rprl2-201ENSMUST00000157150 290 ntBASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snf8Q9CZ28 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
Snf8Q9CZ28 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Snf8Q9CZ28 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gm11745-201ENSMUST00000121669 448 ntBASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.14□□□□□ -0.15
Snf8Q9CZ28 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snf8Q9CZ28 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms