Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Gm11543-201ENSMUST00000120758 370 ntBASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.4□□□□□ -0.42
Krt88Q9CPR6 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Gm6443-201ENSMUST00000203599 874 ntBASIC12.39□□□□□ -0.43
Krt88Q9CPR6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt88Q9CPR6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.38□□□□□ -0.43
Krt88Q9CPR6 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Krt88Q9CPR6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms