Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm14719-201ENSMUST00000121891 340 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm27437-201ENSMUST00000183429 107 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm27838-201ENSMUST00000184829 128 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.4□□□□□ -0.26
Msh4Q99MT2 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.4□□□□□ -0.26
Msh4Q99MT2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.4□□□□□ -0.26
Msh4Q99MT2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.4□□□□□ -0.26
Msh4Q99MT2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Msh4Q99MT2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Msh4Q99MT2 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Msh4Q99MT2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms