Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm24830-201ENSMUST00000102024 166 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm15376-201ENSMUST00000122258 783 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm25890-201ENSMUST00000177643 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm22614-201ENSMUST00000178300 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm5425-201ENSMUST00000214125 459 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm22042-201ENSMUST00000082989 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm26232-201ENSMUST00000083360 166 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm24136-201ENSMUST00000083374 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm26110-201ENSMUST00000083971 165 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Gm10268-201ENSMUST00000085340 555 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.21□□□□□ -0.13
Col25a1Q99MQ5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col25a1Q99MQ5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm11597-201ENSMUST00000121423 964 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm25261-201ENSMUST00000157416 134 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm25927-201ENSMUST00000175058 117 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm44397-201ENSMUST00000195950 113 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm45219-201ENSMUST00000205602 465 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col25a1Q99MQ5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms