Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Gm16476-201ENSMUST00000221544 139 ntBASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdk5rap3Q99LM2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22065-201ENSMUST00000103753 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22066-201ENSMUST00000103761 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24932-201ENSMUST00000103763 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24115-201ENSMUST00000103799 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22190-201ENSMUST00000103827 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22191-201ENSMUST00000103831 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24721-201ENSMUST00000103849 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm28018-201ENSMUST00000103869 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm26399-201ENSMUST00000103937 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25349-201ENSMUST00000177728 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm23616-201ENSMUST00000177797 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25871-201ENSMUST00000177816 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24752-201ENSMUST00000178240 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24496-201ENSMUST00000178287 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25649-201ENSMUST00000178476 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25548-201ENSMUST00000178681 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm23147-201ENSMUST00000178841 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm26095-201ENSMUST00000179270 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22171-201ENSMUST00000179283 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm23936-201ENSMUST00000179354 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm22619-201ENSMUST00000179516 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25255-201ENSMUST00000179579 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24755-201ENSMUST00000179691 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm26506-201ENSMUST00000179692 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm25086-201ENSMUST00000179931 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm23243-201ENSMUST00000180047 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24659-201ENSMUST00000180212 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24169-201ENSMUST00000180244 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm23689-201ENSMUST00000180354 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm27359-201ENSMUST00000184153 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm27785-201ENSMUST00000184268 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm27466-201ENSMUST00000184396 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm27703-201ENSMUST00000184836 110 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm43474-201ENSMUST00000196415 774 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm18041-201ENSMUST00000218210 618 ntBASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms