Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.43□□□□□ -0.1
Clp1Q99LI9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm22323-201ENSMUST00000103832 109 ntBASIC14.43□□□□□ -0.1
Clp1Q99LI9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm8584-201ENSMUST00000171982 758 ntBASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm37466-201ENSMUST00000195692 652 ntBASIC14.43□□□□□ -0.1
Clp1Q99LI9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.43□□□□□ -0.1
Clp1Q99LI9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clp1Q99LI9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clp1Q99LI9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Mir877-201ENSMUST00000104738 85 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm16570-201ENSMUST00000161951 436 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.42□□□□□ -0.1
Clp1Q99LI9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clp1Q99LI9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gm26461-201ENSMUST00000175064 290 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms