Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm8410-201ENSMUST00000117225 605 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm25144-201ENSMUST00000179561 110 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm25352-201ENSMUST00000179815 110 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cstf3Q99LI7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cstf3Q99LI7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf3Q99LI7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms