Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cstf1Q99LC2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm15808-201ENSMUST00000119046 604 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm13342-201ENSMUST00000121055 207 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm27331-201ENSMUST00000183705 60 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm29705-201ENSMUST00000212598 474 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cstf1Q99LC2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Gm3786-201ENSMUST00000202659 378 ntBASIC13.71□□□□□ -0.21
Cstf1Q99LC2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.71□□□□□ -0.21
Cstf1Q99LC2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf1Q99LC2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf1Q99LC2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf1Q99LC2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cstf1Q99LC2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Cstf1Q99LC2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm1335-201ENSMUST00000121653 386 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm12134-201ENSMUST00000122109 520 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Mir5132-201ENSMUST00000175166 71 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm18753-201ENSMUST00000201000 566 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Gm18473-201ENSMUST00000220543 868 ntBASIC13.7□□□□□ -0.22
Cstf1Q99LC2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms