Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb5Q91XZ5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
Pcdhb5Q91XZ5 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Gm23931-201ENSMUST00000103842 109 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Gm27572-201ENSMUST00000183702 255 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb5Q91XZ5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm12203-201ENSMUST00000118235 598 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm12209-201ENSMUST00000120089 596 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm12134-201ENSMUST00000122109 520 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.13■□□□□ 0.17
Pcdhb5Q91XZ5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gm27514-201ENSMUST00000183692 110 ntBASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb5Q91XZ5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms