Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm17795-201ENSMUST00000214505 757 ntBASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Matn2-206ENSMUST00000228570 2798 ntBASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm24694-201ENSMUST00000180054 110 ntBASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm27663-201ENSMUST00000184839 110 ntBASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhb6Q91XZ4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gm20445-201ENSMUST00000061905 565 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhb6Q91XZ4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb6Q91XZ4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Pcdhb6Q91XZ4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.08□□□□□ -0.15
Pcdhb6Q91XZ4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb6Q91XZ4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb6Q91XZ4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb6Q91XZ4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb6Q91XZ4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb6Q91XZ4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb6Q91XZ4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms