Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhga11Q91XY8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhga11Q91XY8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Gm22175-201ENSMUST00000175007 78 ntBASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhga11Q91XY8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm44719-201ENSMUST00000206404 149 ntBASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga11Q91XY8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pcdhga11Q91XY8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms