Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gm27533-201ENSMUST00000183800 152 ntBASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
H1fooQ8VIK3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H1fooQ8VIK3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm15460-201ENSMUST00000118147 391 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm25144-201ENSMUST00000179561 110 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm25352-201ENSMUST00000179815 110 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm46209-201ENSMUST00000217912 553 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
H1fooQ8VIK3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H1fooQ8VIK3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms