Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Gm10156-201ENSMUST00000122364 462 ntBASIC14.61□□□□□ -0.07
TraipQ8VIG6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.61□□□□□ -0.07
TraipQ8VIG6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.61□□□□□ -0.07
TraipQ8VIG6 Itm2b-204ENSMUST00000228637 783 ntBASIC14.61□□□□□ -0.07
TraipQ8VIG6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TraipQ8VIG6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm13226-201ENSMUST00000117838 404 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm45784-201ENSMUST00000188360 142 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Gm6091-201ENSMUST00000098307 165 ntBASIC14.6□□□□□ -0.07
TraipQ8VIG6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TraipQ8VIG6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm11425-201ENSMUST00000119608 498 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Snora78-201ENSMUST00000158630 128 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms