Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.99□□□□□ -0.33
Ndc1Q8VCB1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Gm14127-201ENSMUST00000117906 678 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Gm18187-201ENSMUST00000196476 984 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc1Q8VCB1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc1Q8VCB1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ndc1Q8VCB1 Gm18905-201ENSMUST00000205454 928 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms