Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.08■□□□□ 0
Rpap2Q8VC34 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Gm28760-201ENSMUST00000185995 736 ntBASIC15.08■□□□□ 0
Rpap2Q8VC34 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Gm5279-201ENSMUST00000199575 745 ntBASIC15.08■□□□□ 0
Rpap2Q8VC34 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.08■□□□□ 0
Rpap2Q8VC34 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.08■□□□□ 0
Rpap2Q8VC34 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Rpap2Q8VC34 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpap2Q8VC34 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm42612-201ENSMUST00000197986 623 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm43170-201ENSMUST00000199827 612 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm7730-201ENSMUST00000212486 454 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpap2Q8VC34 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.07■□□□□ 0
Rpap2Q8VC34 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.07■□□□□ 0
Rpap2Q8VC34 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rpap2Q8VC34 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.06■□□□□ 0
Rpap2Q8VC34 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.06■□□□□ 0
Rpap2Q8VC34 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.06■□□□□ 0
Rpap2Q8VC34 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.06■□□□□ 0
Rpap2Q8VC34 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rpap2Q8VC34 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpap2Q8VC34 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.05■□□□□ 0
Rpap2Q8VC34 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms