Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim29Q8R2Q0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm8927-201ENSMUST00000181978 981 ntBASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Gm3222-201ENSMUST00000071282 990 ntBASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim29Q8R2Q0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim29Q8R2Q0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm13385-201ENSMUST00000121089 220 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm7775-201ENSMUST00000218871 853 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm9063-201ENSMUST00000223299 582 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Acot6-202ENSMUST00000222921 3622 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim29Q8R2Q0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim29Q8R2Q0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms