Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf39Q8K2Z2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Gm27772-201ENSMUST00000184900 187 ntBASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf39Q8K2Z2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Gm9797-201ENSMUST00000052902 613 ntBASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf39Q8K2Z2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.25□□□□□ -0.13
Prpf39Q8K2Z2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms