Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgcs1Q8JZK9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hmgcs1Q8JZK9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgcs1Q8JZK9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgcs1Q8JZK9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.11□□□□□ -0.31
Hmgcs1Q8JZK9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hmgcs1Q8JZK9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms