Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.96□□□□□ -0.34
Rfwd3Q8CIK8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfwd3Q8CIK8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm24694-201ENSMUST00000180054 110 ntBASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm27663-201ENSMUST00000184839 110 ntBASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm5425-201ENSMUST00000214125 459 ntBASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfwd3Q8CIK8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Gm29667-201ENSMUST00000190817 490 ntBASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfwd3Q8CIK8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms