Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm14042-201ENSMUST00000120139 833 ntBASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm12151-201ENSMUST00000121374 290 ntBASIC13.89□□□□□ -0.19
Clip4Q8CI96 Mir1897-201ENSMUST00000122581 272 ntBASIC13.89□□□□□ -0.19
Clip4Q8CI96 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Dupd1-202ENSMUST00000224735 548 ntBASIC13.89□□□□□ -0.19
Clip4Q8CI96 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.89□□□□□ -0.19
Clip4Q8CI96 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Gm9063-201ENSMUST00000223299 582 ntBASIC13.88□□□□□ -0.19
Clip4Q8CI96 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.88□□□□□ -0.19
Clip4Q8CI96 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clip4Q8CI96 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Gm15653-201ENSMUST00000119247 907 ntBASIC13.87□□□□□ -0.19
Clip4Q8CI96 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Mir8102-201ENSMUST00000184148 139 ntBASIC13.87□□□□□ -0.19
Clip4Q8CI96 AA619741-201ENSMUST00000195095 646 ntBASIC13.87□□□□□ -0.19
Clip4Q8CI96 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.87□□□□□ -0.19
Clip4Q8CI96 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clip4Q8CI96 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms