Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 AY702102-202ENSMUST00000194651 1173 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Mir1982-201ENSMUST00000157368 74 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab11fip3Q8CHD8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm8213-201ENSMUST00000118191 441 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm11425-201ENSMUST00000119608 498 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9396-201ENSMUST00000076703 567 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm26315-201ENSMUST00000083890 321 ntBASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab11fip3Q8CHD8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Gm6091-201ENSMUST00000098307 165 ntBASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms