Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Gm29608-201ENSMUST00000190444 463 ntBASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alx1Q8C8B0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Gm7653-201ENSMUST00000214567 508 ntBASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alx1Q8C8B0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm12928-201ENSMUST00000117115 573 ntBASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.96■□□□□ 0.15
Alx1Q8C8B0 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.96■□□□□ 0.15
Alx1Q8C8B0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alx1Q8C8B0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.95■□□□□ 0.14
Alx1Q8C8B0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms