Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Gm12859-201ENSMUST00000117834 427 ntBASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc60Q8C4J0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc60Q8C4J0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc60Q8C4J0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Gm27772-201ENSMUST00000184900 187 ntBASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Gm43094-201ENSMUST00000196549 921 ntBASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms