Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rft1Q8C3B8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm25287-201ENSMUST00000103846 110 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm22918-201ENSMUST00000103855 110 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rft1Q8C3B8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Gm24158-201ENSMUST00000175263 71 ntBASIC12.28□□□□□ -0.44
Rft1Q8C3B8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rft1Q8C3B8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms