Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh3rf3Q8C120 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sh3rf3Q8C120 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sh3rf3Q8C120 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sh3rf3Q8C120 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh3rf3Q8C120 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm15487-201ENSMUST00000122373 465 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm8927-201ENSMUST00000181978 981 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm44872-201ENSMUST00000207864 420 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gm3222-201ENSMUST00000071282 990 ntBASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms