Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Gm27701-201ENSMUST00000184498 110 ntBASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim47Q8C0E3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim47Q8C0E3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim47Q8C0E3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Gm24447-201ENSMUST00000083977 338 ntBASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim47Q8C0E3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim47Q8C0E3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms