Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm15770-201ENSMUST00000117498 584 ntBASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm9794-201ENSMUST00000202370 423 ntBASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm9908-201ENSMUST00000211534 448 ntBASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup54Q8BTS4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup54Q8BTS4 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Gm15678-201ENSMUST00000117573 960 ntBASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Gm12490-201ENSMUST00000120255 560 ntBASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup54Q8BTS4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms