Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.69■□□□□ 0.42
Col16a1Q8BLX7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm25214-201ENSMUST00000104573 129 ntBASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm26185-201ENSMUST00000157692 266 ntBASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm22902-201ENSMUST00000158488 302 ntBASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col16a1Q8BLX7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Gm4909-201ENSMUST00000118749 794 ntBASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Gm38317-201ENSMUST00000195564 343 ntBASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col16a1Q8BLX7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm22121-201ENSMUST00000175148 54 ntBASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm25732-201ENSMUST00000175168 60 ntBASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm14028-201ENSMUST00000117434 479 ntBASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Gm7857-201ENSMUST00000117957 358 ntBASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms